SUBJECTS : Plant Genomics | Plant Biology | Genomic Application
The Plant Genome: 2023, vol: , issue:
- 1)- Edwige Gaby Nkouaya Mbanjo, Erstelle A Pasion, Huw Jones, Socorro Carandang, Gopal Misra, John Carlos Ignacio, Tobias Kretzschmar, Nese Sreenivasulu, Lesley Ann Boyd. Unravelling marker trait associations linking nutritional value with pigmentation in rice seed. The plant genome. 2023, 16 (4): e20360
Cited : 1Read More - 2)- Shameem Younuskunju, Yasmin A Mohamoud, Lisa S Mathew, Klaus F X Mayer, Karsten Suhre, Joel A Malek. Genome-wide association of dry (Tamar) date palm fruit color. The plant genome. 2023, 16 (4): e20373Cited : 4Read More
- 3)- Marc-André Lemay, Maxime de Ronne, Richard Bélanger, François Belzile. k-mer-based GWAS enhances the discovery of causal variants and candidate genes in soybean. The plant genome. 2023, 16 (4): e20374Cited : 2Read More
- 4)- Vadthya Lokya, Sejal Parmar, Arun K Pandey, Hari K Sudini, Dongxin Huai, Peggy Ozias-Akins, Christine H Foyer, Chogozie Victor Nwosu, Barbara Karpinska, Alison Baker, Pei Xu, Boshou Liao, Reyazul Rouf Mir, Xiaoping Chen, Baozhu Guo, Henry T Nguyen, Rakesh Kumar, Sandeep K Bera, Prashant Singam, Anirudh Kumar, Rajeev K Varshney, Manish K Pandey. Prospects for developing allergen-depleted food crops. The plant genome. 2023, 16 (4): e20375Cited : 3Read More
- 5)- Maria Jurado, Carmen García-Fernández, Ana Campa, Juan Jose Ferreira. Genetic erosion within the Fabada dry bean market class revealed by high-throughput genotyping. The plant genome. 2023, 16 (4): e20379Cited : 0Read More
- 6)- Jayanta Roy, Alvaro Soler-Garzón, Phillip N Miklas, Rian Lee, Josh Clevenger, Zachary Myers, Walid Korani, Phillip E McClean. Integrating de novo QTL-seq and linkage mapping to identify quantitative trait loci conditioning physiological resistance and avoidance to white mold disease in dry bean. The plant genome. 2023, 16 (4): e20380Cited : 3Read More
- 7)- Hongliang Wang, Amy Bernardo, Paul St Amand, Guihua Bai, Robert L Bowden, Mary J Guttieri, Katherine W Jordan. Skim exome capture genotyping in wheat. The plant genome. 2023, 16 (4): e20381Cited : 2Read More
- 8)- Vanika Garg, Aamir W Khan, Kevin Fengler, Victor Llaca, Yuxuan Yuan, Tri D Vuong, Charlotte Harris, Ting-Fung Chan, Hon Ming Lam, Rajeev K Varshney, Henry T Nguyen. Near-gapless genome assemblies of Williams 82 and Lee cultivars for accelerating global soybean research. The plant genome. 2023, 16 (4): e20382Cited : 6Read More
- 9)- John N Cameron, Rex Bernardo. Whole-genome versus per-chromosome targeted recombination: Simulations and predicted gains in maize with an integer programming model. The plant genome. 2023, 16 (4): e20383Cited : 0Read More
- 10)- Mark J Miller, Qijian Song, Zenglu Li. Genomic selection of soybean (Glycine max) for genetic improvement of yield and seed composition in a breeding context. The plant genome. 2023, 16 (4): e20384Cited : 5Read More
- 11)- Vishal Singh, Margaret Krause, Devinder Sandhu, Rajandeep S Sekhon, Amita Kaundal. Salinity stress tolerance prediction for biomass-related traits in maize (Zea mays L.) using genome-wide markers. The plant genome. 2023, 16 (4): e20385Cited : 1Read More
- 12)- Chensong Chen, Owen Powell, Eric Dinglasan, Elizabeth M Ross, Seema Yadav, Xianming Wei, Felicity Atkin, Emily Deomano, Ben J Hayes. Genomic prediction with machine learning in sugarcane, a complex highly polyploid clonally propagated crop with substantial non-additive variation for key traits. The plant genome. 2023, 16 (4): e20390Cited : 1Read More
- 13)- Dennis N Katuuramu, Amnon Levi, William P Wechter. Genome-wide association study of soluble solids content, flesh color, and fruit shape in citron watermelon. The plant genome. 2023, 16 (4): e20391Cited : 2Read More
- 14)- Chieh-Ying Lee, Jaw-Fen Wang, Chia-Hui Chang, Chih-Wei Tung. Analyzing genomic variation in cultivated pumpkins and identification of candidate genes controlling seed traits. The plant genome. 2023, 16 (4): e20393Cited : 0Read More
- 15)- Manish K Pandey, Reyazul Rouf Mir, Nese Sreenivasulu. The Plant Genome special section: Grain quality and nutritional genomics for breeding next-generation crops. The plant genome. 2023, 16 (4): e20396Cited : 0Read More
- 16)- Raju Chaudhary, Erin E Higgins, Christina Eynck, Andrew G Sharpe, Isobel A P Parkin. Mapping QTL for vernalization requirement identified adaptive divergence of the candidate gene Flowering Locus C in polyploid Camelina sativa. The plant genome. 2023, 16 (4): e20397Cited : 1Read More
- 17)- Michael A Hardigan, Mitchell J Feldmann, Jason Carling, Anyu Zhu, Andrzej Kilian, Randi A Famula, Glenn S Cole, Steven J Knapp. A medium-density genotyping platform for cultivated strawberry using DArTag technology. The plant genome. 2023, 16 (4): e20399Cited : 4Read More
- 18)- Tri D Vuong, Liliana Florez-Palacios, Leandro Mozzoni, Michael Clubb, Chuck Quigley, Qijian Song, Shaila Kadam, Yuxuan Yuan, Ting Fung Chan, Mohamed Abdur Rouf Mian, Henry T Nguyen. Genomic analysis and characterization of new loci associated with seed protein and oil content in soybeans. The plant genome. 2023, 16 (4): e20400Cited : 0Read More
- 19)- Joyce N Njuguna, Lindsay V Clark, Alexander E Lipka, Kossonou G Anzoua, Larisa Bagmet, Pavel Chebukin, Maria S Dwiyanti, Elena Dzyubenko, Nicolay Dzyubenko, Bimal Kumar Ghimire, Xiaoli Jin, Douglas A Johnson, Jens Bonderup Kjeldsen, Hironori Nagano, Ivone de Bem Oliveira, Junhua Peng, Karen Koefoed Petersen, Andrey Sabitov, Eun Soo Seong, Toshihiko Yamada, Ji Hye Yoo, Chang Yeon Yu, Hua Zhao, Patricio Munoz, Stephen P Long, Erik J Sacks. Impact of genotype-calling methodologies on genome-wide association and genomic prediction in polyploids. The plant genome. 2023, 16 (4): e20401Cited : 1Read More
- 20)- Wai-Shing Yung, Ting-Fung Chan, Fanjiang Kong, Hon-Ming Lam. The Plant Genome special section: Epigenome and epitranscriptome in plant-environment interactions. The plant genome. 2023, 16 (4): e20404Cited : 0Read More
- 21)- Changyi Wang, Fangfang Ran, Yuwei Zang, Liangwang Liu, Dayong Wang, Yi Min. Genome-wide identification and expression analysis of heat shock protein gene family in cassava. The plant genome. 2023, 16 (4): e20407Cited : 1Read More
- 22)- William M Singer, Yi-Chen Lee, Zachary Shea, Caio Canella Vieira, Dongho Lee, Xiaoying Li, Mia Cunicelli, Shaila S Kadam, Mohammad Aamir Waseem Khan, Grover Shannon, M A Rouf Mian, Henry T Nguyen, Bo Zhang. Soybean genetics, genomics, and breeding for improving nutritional value and reducing antinutritional traits in food and feed. The plant genome. 2023, 16 (4): e20415Cited : 7Read More
- 23)- . Research highlights, The Plant Genome, Volume 16, Issue 4. The plant genome. 2023, 16 (4): e20420Cited : 0Read More
- 24)- Zhen Liang, Sha Wei, Yuqing Wu, Yingjie Guo, Ben Zhang, Honghu Yang. Temporally gene knockout using heat shock-inducible genome-editing system in plants. The plant genome. 2023, 16 (3): e20376Cited : 2Read More
- 25)- Cassandria G Tay Fernandez, Philipp E Bayer, Jakob Petereit, Rajeev Varshney, Jacqueline Batley, David Edwards. The conservation of gene models can support genome annotation. The plant genome. 2023, 16 (3): e20377Cited : 0Read More
- 26)- . Research highlights, The Plant Genome, Volume 16, Issue 3. The plant genome. 2023, 16 (3): e20386Cited : 0Read More
- 27)- Heike M Mueller, Bastian L Franzisky, Maxim Messerer, Baoguo Du, Thomas Lux, Philip J White, Sebastien Christian Carpentier, Jana Barbro Winkler, Joerg-Peter Schnitzler, Hamed A El-Serehy, Khaled A S Al-Rasheid, Naif Al-Harbi, Saleh Alfarraj, Jörg Kudla, Jaakko Kangasjärvi, Michael Reichelt, Axel Mithöfer, Klaus F X Mayer, Heinz Rennenberg, Peter Ache, Rainer Hedrich, Christoph-Martin Geilfus. Integrative multi-omics analyses of date palm (Phoenix dactylifera) roots and leaves reveal how the halophyte land plant copes with sea water. The plant genome. 2023, : e20372Cited : 2Read More
- 28)- Ivica Djalovic, Sayanta Kundu, Rajeev Nayan Bahuguna, Ashwani Pareek, Ali Raza, Sneh L Singla-Pareek, P V Vara Prasad, Rajeev K Varshney. Maize and heat stress: Physiological, genetic, and molecular insights. The plant genome. 2023, : e20378Cited : 13Read More
- 29)- Jon Bančič, Damaris A Odeny, Henry F Ojulong, Samuel M Josiah, Jaap Buntjer, R Chris Gaynor, Stephen P Hoad, Gregor Gorjanc, Ian K Dawson. Genomic and phenotypic characterization of finger millet indicates a complex diversification history. The plant genome. 2023, : e20392Cited : 2Read More
- 30)- Ahossi Patrice Koua, Md Nurealam Siddiqui, Katrin Heß, Nikko Klag, Carolyn Mukiri Kambona, Diana Duarte-Delgado, Benedict Chijioke Oyiga, Jens Léon, Agim Ballvora. Genome-wide dissection and haplotype analysis identified candidate loci for nitrogen use efficiency under drought conditions in winter wheat. The plant genome. 2023, : e20394Cited : 2Read More
- 31)- Anmol Kalra, Shailendra Goel, Ani A Elias. Understanding role of roots in plant response to drought: Way forward to climate-resilient crops. The plant genome. 2023, : e20395Cited : 8Read More
- 32)- Amanda R Peters Haugrud, Jyoti Saini Sharma, Qijun Zhang, Andrew J Green, Steven S Xu, Justin D Faris. Identification of robust yield quantitative trait loci derived from cultivated emmer for durum wheat improvement. The plant genome. 2023, : e20398Cited : 0Read More
- 33)- Sofora Jan, Sachin Rustgi, Rutwik Barmukh, Asif B Shikari, Brenton Leske, Amanuel Bekuma, Darshan Sharma, Wujun Ma, Upendra Kumar, Uttam Kumar, Abhishek Bohra, Rajeev K Varshney, Reyazul Rouf Mir. Advances and opportunities in unraveling cold-tolerance mechanisms in the world's primary staple food crops. The plant genome. 2023, : e20402Cited : 2Read More
- 34)- Michael Kanaabi, Fatumah B Namakula, Ephraim Nuwamanya, Ismail S Kayondo, Nicholas Muhumuza, Enoch Wembabazi, Paula Iragaba, Leah Nandudu, Ann Ritah Nanyonjo, Julius Baguma, Williams Esuma, Alfred Ozimati, Mukasa Settumba, Titus Alicai, Angele Ibanda, Robert S Kawuki. Rapid analysis of hydrogen cyanide in fresh cassava roots using NIRSand machine learning algorithms: Meeting end user demand for low cyanogenic cassava. The plant genome. 2023, : e20403Cited : 1Read More
- 35)- Mitchell J Feldmann, Dominique D A Pincot, Mishi V Vachev, Randi A Famula, Glenn S Cole, Steven J Knapp. Accelerating genetic gains for quantitative resistance to verticillium wilt through predictive breeding in strawberry. The plant genome. 2023, : e20405Cited : 3Read More
- 36)- Toby E Newman, Silke Jacques, Christy Grime, Fredrick M Mobegi, Fiona L Kamphuis, Yuphin Khentry, Robert Lee, Lars G Kamphuis. Genetic dissection of domestication traits in interspecific chickpea populations. The plant genome. 2023, : e20408Cited : 1Read More
- 37)- Dongli He, Yifan Li, Cheng Yuan, Xiaoxiong Pei, Rebecca N Damaris, Haiqin Yu, Bao Qian, Yong Liu, Bin Yi, Changjun Huang, Jianmin Zeng. Characterization of the CMS genetic regulation through comparative complete mitochondrial genome sequencing in Nicotiana tabacum. The plant genome. 2023, : e20409Cited : 0Read More
- 38)- Demissew Sertse, Jemanesh K Haile, Ehsan Sari, Valentyna Klymiuk, Amidou N'Diaye, Curtis J Pozniak, Sylvie Cloutier, Sateesh Kagale. Genome scans capture key adaptation and historical hybridization signatures in tetraploid wheat. The plant genome. 2023, : e20410Cited : 0Read More
- 39)- Louis Grillet, En-Jung Hsieh, Wolfgang Schmidt. Transcriptome analysis of iron over-accumulating Arabidopsis genotypes uncover putative novel regulators of systemic and retrograde signaling. The plant genome. 2023, : e20411Cited : 0Read More
- 40)- Anna Maria Mastrangelo, Pablo Roncallo, Oadi Matny, Čegan Radim, Brian Steffenson, Viviana Echenique, Jan Šafář, Raffaella Battaglia, Delfina Barabaschi, Luigi Cattivelli, Hakan Özkan, Elisabetta Mazzucotelli. A new wild emmer wheat panel allows to map new loci associated with resistance to stem rust at seedling stage. The plant genome. 2023, : e20413Cited : 1Read More
- 41)- Amadou Tidiane Sall, Hafssa Kabbaj, Sidi Ould Ely Menoum, Madiama Cisse, Mulatu Geleta, Rodomiro Ortiz, Filippo M Bassi. Durum wheat heat tolerance loci defined via a north-south gradient. The plant genome. 2023, : e20414Cited : 1Read More
- 42)- Jaindra Nath Tripathi, Valentine Otang Ntui, Leena Tripathi. Precision genetics tools for genetic improvement of banana. The plant genome. 2023, : e20416Cited : 2Read More
- 43)- Seema Yadav, Elizabeth M Ross, Xianming Wei, Shouye Liu, Loan To Nguyen, Owen Powell, Lee T Hickey, Emily Deomano, Felicity Atkin, Kai P Voss-Fels, Ben J Hayes. Use of continuous genotypes for genomic prediction in sugarcane. The plant genome. 2023, : e20417Cited : 2Read More
- 44)- Xiangyang Xu, Dolores Mornhinweg, Guihua Bai, Genqiao Li, Ruolin Bian, Amy Bernardo, J Scott Armstrong. Identification of a new Rsg1 allele conferring resistance to multiple greenbug biotypes from barley accessions PI 499276 and PI 566459. The plant genome. 2023, : e20418Cited : 0Read More
- 45)- Paterne A Agre, Lindsay V Clark, Ana Luisa Garcia-Oliveira, Rajaguru Bohar, Patrick Adebola, Robert Asiedu, Ryohei Terauchi, Asrat Asfaw. Identification of diagnostic KASP-SNP markers for routine breeding activities in yam (Dioscorea spp.). The plant genome. 2023, : e20419Cited : 0Read More
- 46)- Alvaro Soler-Garzón, Phillip E McClean, Phillip N Miklas. The alleles bc-u and bc-u (previously bc-4 gene), representing coding mutations within Vps4 AAA+ ATPase ESCRT protein, interact with other genes to condition resistance to BCMV and BCMNV in common bean. The plant genome. 2023, : e20421Cited : 1Read More
- 47)- Xiaomeng Liu, Weiwei Zhang, Ning Tang, Zexiong Chen, Shen Rao, Hua Cheng, Chengrong Luo, Jiabao Ye, Shuiyuan Cheng, Feng Xu. Genomic-wide identification and expression analysis of AP2/ERF transcription factors in Zanthoxylum armatum reveals the candidate genes for the biosynthesis of terpenoids. The plant genome. 2023, : e20422Cited : 0Read More
- 48)- Matthew J Dzievit, Xianran Li, Jianming Yu. Genetic mapping of dynamic control of leaf angle across multiple canopy levels in maize. The plant genome. 2023, : e20423Cited : 0Read More
