1)- Gaetan Thilliez, Tapfumanei Mashe, Blessmore V Chaibva, Valerie Robertson, Matt Bawn, Andrew Tarupiwa, Faustinos T Takawira, Marleen M Kock, Stanley Midzi, Lusubilo W Mwamakamba, Jorge Matheu, Agnes Juru, Robert A Kingsley, Marthie M Ehlers. Population structure of Salmonella enterica Typhi in Harare, Zimbabwe (2012-19) before typhoid conjugate vaccine roll-out: a genomic epidemiology study.The Lancet. Microbe. 2023, 4 (12): e1005-e1014
2)- Christoph Buchta, Stephan W Aberle, Franz Allerberger, Bernhard Benka, Irene Görzer, Andrea Griesmacher, Wolfgang Hübl, Wolfgang Huf, Stylianos Kapiotis, Mathias M Müller, Erich Neuwirth, Elisabeth Puchhammer-Stöckl, Lukas Weseslindtner, Jeremy V Camp. Performance of SARS-CoV-2 nucleic acid amplification testing in Austria as measured by external quality assessment schemes during 3 years of the COVID-19 pandemic: an observational retrospective study.The Lancet. Microbe. 2023, 4 (12): e1015-e1023
3)- Marie-Astrid Hoogerwerf, Jacqueline J Janse, Vincent P Kuiper, Roos van Schuijlenburg, Yvonne Cm Kruize, Jeroen C Sijtsma, Beckley A Nosoh, Jan-Pieter R Koopman, Petra H Verbeek-Menken, Inge M Westra, Pauline Meij, Eric At Brienen, Leo G Visser, Lisette van Lieshout, Simon P Jochems, Maria Yazdanbakhsh, Meta Roestenberg. Protective efficacy of short-term infection with Necator americanus hookworm larvae in healthy volunteers in the Netherlands: a single-centre, placebo-controlled, randomised, controlled, phase 1 trial.The Lancet. Microbe. 2023, 4 (12): e1024-e1034
4)- Kate S Baker, Elita Jauneikaite, Jamie G Nunn, Janet T Midega, Rifat Atun, Kathryn E Holt, Kamini Walia, Benjamin P Howden, Heather Tate, Iruka N Okeke, Alessandra Carattoli, Li Yang Hsu, Katie L Hopkins, Dishon M Muloi, Nicole E Wheeler, David M Aanensen, Lewis C E Mason, Jonah Rodgus, Rene S Hendriksen, Sabiha Y Essack, Beverly Egyir, Alison L Halpin, Duncan R MacCannell, Josefina Campos, Padmini Srikantiah, Nicholas A Feasey, Sharon J Peacock, . Evidence review and recommendations for the implementation of genomics for antimicrobial resistance surveillance: reports from an international expert group.The Lancet. Microbe. 2023, 4 (12): e1035-e1039
5)- Elita Jauneikaite, Kate S Baker, Jamie G Nunn, Janet T Midega, Li Yang Hsu, Shweta R Singh, Alison L Halpin, Katie L Hopkins, James R Price, Padmini Srikantiah, Beverly Egyir, Iruka N Okeke, Kathryn E Holt, Sharon J Peacock, Nicholas A Feasey, . Genomics for antimicrobial resistance surveillance to support infection prevention and control in health-care facilities.The Lancet. Microbe. 2023, 4 (12): e1040-e1046
6)- Kate S Baker, Elita Jauneikaite, Katie L Hopkins, Stephanie W Lo, Leonor Sánchez-Busó, Maria Getino, Benjamin P Howden, Kathryn E Holt, Lillian A Musila, Rene S Hendriksen, Daniel G Amoako, David M Aanensen, Iruka N Okeke, Beverly Egyir, Jamie G Nunn, Janet T Midega, Nicholas A Feasey, Sharon J Peacock, . Genomics for public health and international surveillance of antimicrobial resistance.The Lancet. Microbe. 2023, 4 (12): e1047-e1055
7)- Dishon M Muloi, Elita Jauneikaite, Muna F Anjum, Sabiha Y Essack, David A Singleton, Mitchelle R Kasudi, Matthew J Wade, Beverly Egyir, Jamie G Nunn, Janet T Midega, Sharon J Peacock, Nicholas A Feasey, Kate S Baker, Ruth N Zadoks, . Exploiting genomics for antimicrobial resistance surveillance at One Health interfaces.The Lancet. Microbe. 2023, 4 (12): e1056-e1062
8)- Nicole E Wheeler, Vivien Price, Edward Cunningham-Oakes, Kara K Tsang, Jamie G Nunn, Janet T Midega, Muna F Anjum, Matthew J Wade, Nicholas A Feasey, Sharon J Peacock, Elita Jauneikaite, Kate S Baker, . Innovations in genomic antimicrobial resistance surveillance.The Lancet. Microbe. 2023, 4 (12): e1063-e1070
13)- Brigitta Derendinger, Anzaan Dippenaar, Margaretha de Vos, Stella Huo, Rencia Alberts, Rebecca Tadokera, Jason Limberis, Frik Sirgel, Tania Dolby, Claudia Spies, Anja Reuter, Megan Folkerts, Christopher Allender, Darrin Lemmer, Annelies Van Rie, Sebastien Gagneux, Leen Rigouts, Julian Te Riele, Keertan Dheda, David M Engelthaler, Robin Warren, John Metcalfe, Helen Cox, Grant Theron. Bedaquiline resistance in patients with drug-resistant tuberculosis in Cape Town, South Africa: a retrospective longitudinal cohort study.The Lancet. Microbe. 2023, 4 (12): e972-e982
17)- Eva Stadler, Khai Li Chai, Timothy E Schlub, Deborah Cromer, Shanchita R Khan, Mark N Polizzotto, Stephen J Kent, Claire Beecher, Heath White, Tari Turner, Nicole Skoetz, Lise Estcourt, Zoe K McQuilten, Erica M Wood, David S Khoury, Miles P Davenport. Determinants of passive antibody efficacy in SARS-CoV-2 infection: a systematic review and meta-analysis.The Lancet. Microbe. 2023, 4 (11): e883-e892
18)- Emmanuel Musisi, Adam Wyness, Sahar Eldirdiri, Evelin Dombay, Bariki Mtafya, Nyanda E Ntinginya, Norbert Heinrich, Gibson S Kibiki, Michael Hoelscher, Martin Boeree, Rob Aarnoutse, Stephen H Gillespie, Wilber Sabiiti, . Effect of seven anti-tuberculosis treatment regimens on sputum microbiome: a retrospective analysis of the HIGHRIF study 2 and PanACEA MAMS-TB clinical trials.The Lancet. Microbe. 2023, 4 (11): e913-e922
19)- Drew J Schwartz, Amy Langdon, Xiaoqing Sun, Céline Langendorf, Fatou Berthé, Rebecca F Grais, Indi Trehan, Sheila Isanaka, Gautam Dantas. Effect of amoxicillin on the gut microbiome of children with severe acute malnutrition in Madarounfa, Niger: a retrospective metagenomic analysis of a placebo-controlled trial.The Lancet. Microbe. 2023, 4 (11): e931-e942
20)- Jessica K Calland, Kaisa Haukka, Stephen W Kpordze, Atanyiwoen Brusah, Marta Corbella, Cristina Merla, Ørjan Samuelsen, Edward J Feil, Davide Sassera, Akosua B Karikari, Courage K S Saba, Harry A Thorpe, Jukka Corander. Population structure and antimicrobial resistance among Klebsiella isolates sampled from human, animal, and environmental sources in Ghana: a cross-sectional genomic One Health study.The Lancet. Microbe. 2023, 4 (11): e943-e952
21)- Matthew Hall, Tanya Golubchik, David Bonsall, Lucie Abeler-Dörner, Mohammed Limbada, Barry Kosloff, Ab Schaap, Mariateresa de Cesare, George MacIntyre-Cockett, Newton Otecko, William Probert, Oliver Ratmann, Ana Bulas Cruz, Estelle Piwowar-Manning, David N Burns, Myron S Cohen, Deborah J Donnell, Susan H Eshleman, Musonda Simwinga, Sarah Fidler, Richard Hayes, Helen Ayles, Christophe Fraser, , . Demographics of sources of HIV-1 transmission in Zambia: a molecular epidemiology analysis in the HPTN 071 PopART study.The Lancet. Microbe. 2023, :
24)- Twisha S Patel, Hatim Sati, Fernanda C Lessa, Payal K Patel, Arjun Srinivasan, Lauri A Hicks, Melinda M Neuhauser, Deborah Tong, Maarten van der Heijden, Solange C Alves, Haileyesus Getahun, Benjamin J Park. Defining access without excess: expanding appropriate use of antibiotics targeting multidrug-resistant organisms.The Lancet. Microbe. 2023, :
26)- Daniel F M Monte, Mateus Lacerda Pereira Lemos, Celso José Bruno de Oliveira. Emerging threats: global distribution and diversity of carbapenem resistance genes in Kluyvera intermedia.The Lancet. Microbe. 2023, :
27)- Mariano A Molina, Willem J G Melchers, Virginia Núñez-Samudio, Iván Landires. The emerging role of Lactobacillus acidophilus in the cervicovaginal microenvironment.The Lancet. Microbe. 2023, :
30)- Anita Mitra, Murat Gultekin, Laura Burney Ellis, Nicolò Bizzari, Sarah Bowden, Nadja Taumberger, Taja Bracic, Pedro Vieira-Baptista, Jalid Sehouli, Maria Kyrgiou. Genital tract microbiota composition profiles and use of prebiotics and probiotics in gynaecological cancer prevention: review of the current evidence, the European Society of Gynaecological Oncology prevention committee statement.The Lancet. Microbe. 2023, :
31)- Kirstin I Oliveira Roster, Yonatan H Grad. Estimating changes in antibiotic consumption in the USA with the introduction of doxycycline post-exposure prophylaxis.The Lancet. Microbe. 2023, :
32)- Rohit Parthasarathy, Denis Wakefield, Fernando S Santiago, Nadeem O Kaakoush, Nicodemus Tedla. Horizontal gene transfer and endogenous retroviruses as mechanisms for molecular mimicry.The Lancet. Microbe. 2023, :
33)- David N Springer, Iris Medits, Lukas Weseslindtner, Karin Stiasny, Judith H Aberle. SARS-CoV-2 neutralising antibody response to bivalent booster after omicron infection.The Lancet. Microbe. 2023, :
34)- Stuart D Blacksell, Sandhya Dhawan, Marina Kusumoto, Khanh K Le, Kathrin Summermatter, Joseph O'Keefe, Joseph P Kozlovac, Salama S Almuhairi, Indrawati Sendow, Christina M Scheel, Anthony Ahumibe, Zibusiso M Masuku, Allan M Bennett, Kazunobu Kojima, David R Harper, Keith Hamilton. Laboratory-acquired infections and pathogen escapes worldwide between 2000 and 2021: a scoping review.The Lancet. Microbe. 2023, :
35)- Patrick M Meyer Sauteur, Michael L Beeton, . Mycoplasma pneumoniae: delayed re-emergence after COVID-19 pandemic restrictions.The Lancet. Microbe. 2023, :
36)- Pierre R Smeesters, Gabrielle de Crombrugghe, Shu Ki Tsoi, Céline Leclercq, Ciara Baker, Joshua Osowicki, Caroline Verhoeven, Anne Botteaux, Andrew C Steer. Global Streptococcus pyogenes strain diversity, disease associations, and implications for vaccine development: a systematic review.The Lancet. Microbe. 2023, :
37)- Ana María García-Marín, Irving Cancino-Muñoz, Manuela Torres-Puente, Luis M Villamayor, Rafael Borrás, María Borrás-Máñez, Montserrat Bosque, Juan J Camarena, Ester Colomer-Roig, Javier Colomina, Isabel Escribano, Oscar Esparcia-Rodríguez, Ana Gil-Brusola, Concepción Gimeno, Adelina Gimeno-Gascón, Bárbara Gomila-Sard, Damiana González-Granda, Nieves Gonzalo-Jiménez, María Remedio Guna-Serrano, José Luis López-Hontangas, Coral Martín-González, Rosario Moreno-Muñoz, David Navarro, María Navarro, N. Role of the first WHO mutation catalogue in the diagnosis of antibiotic resistance in Mycobacterium tuberculosis in the Valencia Region, Spain: a retrospective genomic analysis.The Lancet. Microbe. 2023, :
39)- Courtney P Olwagen, Sarah L Downs, Alane Izu, Lebohang Tharasimbi, Lara Van Der Merwe, Marta C Nunes, Shabir A Madhi. Bacterial nasopharyngeal colonisation in children in South Africa before and during the COVID-19 pandemic: an observational study.The Lancet. Microbe. 2023, :
40)- Daniel Fm Monte, Celso Jose Bruno de Oliveira. Global trends in the increasing prevalence of the fosfomycin resistance gene in Staphylococcus aureus.The Lancet. Microbe. 2023, :
44)- Zhiyuan Chen, Philippe Lemey, Hongjie Yu. Approaches and challenges to inferring the geographical source of infectious disease outbreaks using genomic data.The Lancet. Microbe. 2023, :
47)- Christoph Buchta, Heinz Zeichhardt, Andreas Osterman, Lucy A Perrone, Andrea Griesmacher. Do not blindly trust negative diagnostic test results!The Lancet. Microbe. 2023, :